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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM82303.1Putative ABC transporter ATP-binding protein. (593 aa)    
Predicted Functional Partners:
OOM82304.1
Putative multidrug export ATP-binding/permease protein.
 
  
 
0.943
lagD
lactococcin-G-processing and transport ATP-binding protein LagD.
 
 
0.864
grsB_3
Gramicidin S synthase 2.
  
 0.822
OOM76042.1
Putative ABC transporter ATP-binding protein.
 
  
 
0.770
OOM82564.1
Putative ABC transporter ATP-binding protein.
 
  
 
0.757
OOM78172.1
Putative ABC transporter ATP-binding protein.
 
  
 
0.757
msbA_3
Lipid A export ATP-binding/permease protein MsbA.
 
    
0.652
pstB3
Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.631
dhbE
2,3-dihydroxybenzoate-AMP ligase.
  
  
 0.504
tipA
HTH-type transcriptional activator TipA.
  
    0.490
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.