STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM82188.1N-acetylmuramoyl-L-alanine amidase. (174 aa)    
Predicted Functional Partners:
lytB_2
Putative endo-beta-N-acetylglucosaminidase precursor.
  
 
 0.813
OOM82185.1
Hypothetical protein.
       0.773
OOM82186.1
Bacteriophage holin.
       0.773
OOM82187.1
Hypothetical protein.
       0.773
gluP
Rhomboid protease GluP.
   
   0.624
OOM75730.1
Hypothetical protein.
  
 0.611
OOM79790.1
Hypothetical protein.
    
   0.599
OOM82189.1
Hypothetical protein.
       0.462
OOM82190.1
Hypothetical protein.
       0.462
OOM75723.1
Putative peptidoglycan binding domain protein.
  
 
 0.452
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.