Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
msrAPeptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (157 aa)    
Predicted Functional Partners:
msrB
Peptide methionine sulfoxide reductase MsrB.
 
 0.995
grxC
Glutaredoxin-3.
  
 
 0.888
tyrS_2
tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
    
 0.759
gpx1_1
Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.
  
 
 0.693
gpx1_2
Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.
  
 
 0.693
udk_2
Uridine kinase.
    
 0.683
flgK
Flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
    
   0.634
metH
Methionine synthase.
  
  
 0.567
cdr_1
Coenzyme A disulfide reductase.
   
 
 0.518
cdr_2
Coenzyme A disulfide reductase.
   
 
 0.518
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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