STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM82165.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
dnaJ_1
Chaperone protein DnaJ.
 
     0.963
OOM82163.1
Hypothetical protein.
 
     0.936
OOM79799.1
Hypothetical protein.
  
    0.695
OOM73464.1
CYTH domain protein.
 
    0.641
corA_2
Magnesium transport protein CorA.
  
    0.616
rpiR_3
HTH-type transcriptional regulator RpiR.
  
     0.516
OOM71124.1
LysM domain protein.
  
     0.514
OOM75109.1
Putative GTP cyclohydrolase 1 type 2.
   
    0.497
spoVB_3
Stage V sporulation protein B.
  
     0.459
corA_1
Magnesium transport protein CorA.
   
    0.433
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.