Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM81968.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
OOM81967.1
Hypothetical protein.
       0.768
sulD
Bifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
  0.593
OOM82333.1
Hypothetical protein.
  
 
 0.573
OOM71103.1
Hypothetical protein.
  
 
 0.561
engD_1
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.525
celA_2
Endoglucanase A precursor.
    
 0.525
celE_3
Endoglucanase E precursor.
    
 0.525
engD_2
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.525
OOM81966.1
Hypothetical protein.
       0.515
OOM81969.1
Phage portal protein, SPP1 Gp6-like.
       0.515
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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