Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM81895.1Hypothetical protein; N-terminal phage replisome organiser (Phage_rep_org_N). (267 aa)    
Predicted Functional Partners:
OOM81816.1
Signal peptidase (SPase) II.
  
     0.512
OOM72922.1
Phage-related minor tail protein.
 
   
 0.493
tuaE
Teichuronic acid biosynthesis protein TuaE.
  
     0.483
OOM79118.1
Transposase DDE domain protein.
  
     0.481
dnaX_1
DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.473
lytA_14
Autolysin.
  
     0.449
OOM79187.1
Transposase DDE domain protein.
  
     0.448
OOM78548.1
Hypothetical protein.
  
     0.440
lytA_8
Autolysin.
  
     0.426
lytB_6
Putative endo-beta-N-acetylglucosaminidase precursor.
  
     0.415
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.