Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OOM81898.1Hypothetical protein. (235 aa)    
Predicted Functional Partners:
hsdR_1
Type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   
 0.953
hsdM
Type I restriction enzyme EcoKI M protein.
 
     0.951
OOM81900.1
Putative type-1 restriction enzyme specificity protein.
 
    0.950
OOM81902.1
Antitoxin HipB.
       0.686
OOM79821.1
Hypothetical protein.
      0.647
OOM76984.1
Putative type I restriction enzymeP M protein.
 
     0.542
yfkN
Trifunctional nucleotide phosphoesterase protein YfkN precursor; Belongs to the 5'-nucleotidase family.
  
 
  0.497
mazG
Nucleoside triphosphate pyrophosphohydrolase.
    
  0.492
OOM76204.1
Bifunctional NMN adenylyltransferase/nudix hydrolase.
 
 
  0.474
yutF
Putative hydrolase YutF; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
     
  0.463
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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