Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOM81900.1Putative type-1 restriction enzyme specificity protein. (393 aa)    
Predicted Functional Partners:
hsdM
Type I restriction enzyme EcoKI M protein.
 
 0.997
hsdR_1
Type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.989
OOM76984.1
Putative type I restriction enzymeP M protein.
 
 
 0.987
OOM81898.1
Hypothetical protein.
 
    0.950
hsdR_2
Type-1 restriction enzyme R protein.
 
 
 0.920
OOM81902.1
Antitoxin HipB.
  
  
 0.708
OOM76418.1
Hypothetical protein.
 
    0.693
hsdS
Type-1 restriction enzyme EcoKI specificity protein.
  
     0.676
atpF
ATP synthase subunit b, sodium ion specific; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
   
 
 0.663
polA_2
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.651
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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