Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOM81915.1Cyclomaltodextrinase; Belongs to the glycosyl hydrolase 13 family. (578 aa)    
Predicted Functional Partners:
pulA
Pullulanase precursor; Belongs to the glycosyl hydrolase 13 family.
 
0.923
malG_1
Maltose transport system permease protein MalG.
 
  
 0.865
malE
Maltose-binding periplasmic protein precursor.
 
  
 0.862
grsB_3
Gramicidin S synthase 2.
  
 
 0.836
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
0.828
malF_1
Maltose transport system permease protein MalF.
 
  
 0.825
amyE
Alpha-amylase precursor.
  
  
 0.808
bglF_1
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.807
bglF_2
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.807
bglF_3
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.807
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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