Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOM80298.1 | OOM81754.1 | CLPUN_13370 | CLPUN_09380 | Hypothetical protein. | Hypothetical protein. | 0.710 |
OOM80298.1 | OOM81755.1 | CLPUN_13370 | CLPUN_09390 | Hypothetical protein. | Hypothetical protein. | 0.710 |
OOM80298.1 | immR | CLPUN_13370 | CLPUN_09360 | Hypothetical protein. | HTH-type transcriptional regulator ImmR. | 0.710 |
OOM81753.1 | OOM81754.1 | CLPUN_09370 | CLPUN_09380 | Helix-turn-helix protein. | Hypothetical protein. | 0.691 |
OOM81753.1 | OOM81755.1 | CLPUN_09370 | CLPUN_09390 | Helix-turn-helix protein. | Hypothetical protein. | 0.601 |
OOM81753.1 | immR | CLPUN_09370 | CLPUN_09360 | Helix-turn-helix protein. | HTH-type transcriptional regulator ImmR. | 0.603 |
OOM81754.1 | OOM80298.1 | CLPUN_09380 | CLPUN_13370 | Hypothetical protein. | Hypothetical protein. | 0.710 |
OOM81754.1 | OOM81753.1 | CLPUN_09380 | CLPUN_09370 | Hypothetical protein. | Helix-turn-helix protein. | 0.691 |
OOM81754.1 | OOM81755.1 | CLPUN_09380 | CLPUN_09390 | Hypothetical protein. | Hypothetical protein. | 0.721 |
OOM81754.1 | argB | CLPUN_09380 | CLPUN_45580 | Hypothetical protein. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.501 |
OOM81754.1 | argJ | CLPUN_09380 | CLPUN_45590 | Hypothetical protein. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.488 |
OOM81754.1 | cinA_1 | CLPUN_09380 | CLPUN_14420 | Hypothetical protein. | Putative competence-damage inducible protein; Belongs to the CinA family. | 0.666 |
OOM81754.1 | immR | CLPUN_09380 | CLPUN_09360 | Hypothetical protein. | HTH-type transcriptional regulator ImmR. | 0.529 |
OOM81754.1 | nadE_2 | CLPUN_09380 | CLPUN_39720 | Hypothetical protein. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.594 |
OOM81754.1 | nifJ_1 | CLPUN_09380 | CLPUN_20720 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.523 |
OOM81754.1 | nifJ_2 | CLPUN_09380 | CLPUN_42950 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.523 |
OOM81755.1 | OOM80298.1 | CLPUN_09390 | CLPUN_13370 | Hypothetical protein. | Hypothetical protein. | 0.710 |
OOM81755.1 | OOM81753.1 | CLPUN_09390 | CLPUN_09370 | Hypothetical protein. | Helix-turn-helix protein. | 0.601 |
OOM81755.1 | OOM81754.1 | CLPUN_09390 | CLPUN_09380 | Hypothetical protein. | Hypothetical protein. | 0.721 |
OOM81755.1 | cinA_1 | CLPUN_09390 | CLPUN_14420 | Hypothetical protein. | Putative competence-damage inducible protein; Belongs to the CinA family. | 0.666 |
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