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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM81789.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
OOM81790.1
Hypothetical protein.
       0.825
OOM81791.1
Phage tail sheath protein.
  
    0.808
OOM81788.1
Phage head-tail joining protein.
       0.795
xkdM_2
Phage-like element PBSX protein XkdM.
       0.775
OOM81787.1
Hypothetical protein.
       0.639
OOM81793.1
Hypothetical protein.
       0.605
OOM81786.1
Phage capsid family protein.
       0.565
OOM81785.1
Caudovirus prohead protease.
       0.563
OOM81784.1
Phage portal protein.
       0.560
OOM81782.1
Phage terminase.
       0.544
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.