STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM81799.1Baseplate J-like protein. (357 aa)    
Predicted Functional Partners:
OOM81798.1
Hypothetical protein.
 
 
 0.991
OOM81791.1
Phage tail sheath protein.
 
 
 0.972
OOM71098.1
Hypothetical protein.
 
 
 0.968
OOM82337.1
Hypothetical protein.
 
 
 0.967
OOM71102.1
Hypothetical protein.
 
 
 0.963
OOM71106.1
Phage tail sheath protein.
 
 
 0.960
OOM72919.1
Phage tail sheath protein.
 
 
 0.958
OOM82334.1
LysM domain/BON superfamily protein.
 
 
 0.957
OOM82329.1
Phage tail sheath protein.
 
 
 0.956
OOM72924.1
Bacterial SH3 domain protein.
 
 
 0.952
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.