Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OOM80997.1Stage III sporulation protein AC/AD protein family protein. (127 aa)    
Predicted Functional Partners:
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.996
OOM80995.1
Stage III sporulation protein SpoIIIAF.
  
  
 0.992
OOM80998.1
Stage III sporulation protein AC/AD protein family protein.
 
  
 0.991
OOM80994.1
Hypothetical protein.
 
  
 0.982
OOM80999.1
Stage III sporulation protein SpoAB.
 
  
 0.976
OOM81000.1
Hypothetical protein; Transcription termination factor Rho.
 
  
 0.975
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.941
OOM80993.1
SpoIIIAH-like protein.
  
  
 0.890
spoIIM
Stage II sporulation protein M.
  
  
 0.864
spoIVB
SpoIVB peptidase precursor.
 
   
 0.853
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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