Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
lacZ_1Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (761 aa)    
Predicted Functional Partners:
mro
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
 
 0.873
uxaC
Uronate isomerase.
 
  
 0.868
cbgA
Beta-galactosidase.
  
  
 
0.826
tabA
Toxin-antitoxin biofilm protein TabA.
   
 0.786
OOM76696.1
Bacterial alpha-L-rhamnosidase.
 
 
 0.745
OOM75614.1
Bacterial alpha-L-rhamnosidase.
 
 
 0.745
OOM81065.1
Bacterial alpha-L-rhamnosidase.
 
 
 0.733
OOM76059.1
Bacterial alpha-L-rhamnosidase.
 
 
 0.732
xynB_1
Beta-xylosidase.
  
  
 0.715
agaA
Alpha-galactosidase A precursor.
 
  
  0.697
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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