Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOM80631.1Ferredoxin-2. (105 aa)    
Predicted Functional Partners:
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 0.997
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.997
frdA
Fumarate reductase flavoprotein subunit.
 
 
 0.992
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.951
cysD
Sulfate adenylyltransferase subunit 2.
 
  
  0.941
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
 
 0.939
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 0.914
gltB_1
Ferredoxin-dependent glutamate synthase 1.
    
 0.878
asrC
Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.864
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 0.849
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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