Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
frdAFumarate reductase flavoprotein subunit. (568 aa)    
Predicted Functional Partners:
OOM80631.1
Ferredoxin-2.
 
 
 0.992
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 0.991
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.991
puuB
Gamma-glutamylputrescine oxidoreductase.
  
 0.986
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.979
hndC_2
NADP-reducing hydrogenase subunit HndC.
  
 0.978
cysD
Sulfate adenylyltransferase subunit 2.
 
  
 0.975
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 0.943
asrB
Anaerobic sulfite reductase subunit B.
  
 0.930
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 0.927
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.