STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnH_3ABC transporter glutamine-binding protein GlnH precursor. (292 aa)    
Predicted Functional Partners:
tcyB_1
L-cystine transport system permease protein TcyB.
 0.997
glnQ_2
Glutamine transport ATP-binding protein GlnQ.
 
 0.994
artQ
Arginine transport system permease protein ArtQ.
 0.948
glnP_3
Putative glutamine ABC transporter permease protein GlnP.
 
 0.936
glnM
Putative glutamine ABC transporter permease protein GlnM.
 0.903
yecS
Inner membrane amino-acid ABC transporter permease protein YecS.
 0.901
glnP_1
Putative glutamine ABC transporter permease protein GlnP.
 
 0.899
tcyL_1
L-cystine transport system permease protein TcyL.
 0.894
tcyM
L-cystine transport system permease protein TcyM.
 0.894
tcyL_2
L-cystine transport system permease protein TcyL.
 
 0.891
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.