Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
iap_1Putative endopeptidase p60 precursor. (414 aa)    
Predicted Functional Partners:
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.875
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.872
OOM75381.1
Dipeptidyl-peptidase 6.
 
  
 0.771
cheV
Chemotaxis protein CheV.
 
 
 0.748
fruA_1
PTS system fructose-specific EIIABC component.
     
 0.743
fruA_3
PTS system fructose-specific EIIABC component.
     
 0.743
tap_4
Methyl-accepting chemotaxis protein IV.
    
 0.735
OOM75723.1
Putative peptidoglycan binding domain protein.
  
  
 0.714
barA_1
Signal transduction histidine-protein kinase BarA.
  
 
 0.702
barA_2
Signal transduction histidine-protein kinase BarA.
  
 
 0.670
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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