Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
agrB_2Accessory protein regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family. (198 aa)    
Predicted Functional Partners:
OOM79583.1
Sensory histidine kinase DcuS.
 
  
 0.959
OOM69977.1
Putative AgrB-like protein.
  
  
 
0.840
agrB_4
Accessory protein regulator protein B.
  
  
 
0.821
agrA
Accessory protein regulator protein A.
 
   
 0.757
agrB_1
Accessory protein regulator protein B.
     
  0.688
agrB_3
Accessory protein regulator protein B.
     
  0.688
OOM69980.1
Sensor protein ZraS.
 
  
  0.676
OOM69979.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  
  0.663
dpiB
Sensor histidine kinase DpiB.
 
  
  0.617
OOM79586.1
CAAX amino terminal protease self- immunity.
       0.551
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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