Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
OOM79586.1CAAX amino terminal protease self- immunity. (178 aa)    
Predicted Functional Partners:
rhsC
Putative deoxyribonuclease RhsC.
  
     0.729
rhsB
Putative deoxyribonuclease RhsB.
  
     0.701
lytB_2
Putative endo-beta-N-acetylglucosaminidase precursor.
   
 
 0.649
OOM82379.1
Hypothetical protein.
  
     0.625
OOM82374.1
Hypothetical protein.
  
     0.604
wapA
tRNA3(Ser)-specific nuclease WapA precursor.
  
   
 0.604
OOM73569.1
Hypothetical protein.
  
     0.604
agrB_2
Accessory protein regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
       0.551
nfrA2_2
FMN reductase.
 
    0.532
OOM77131.1
Hypothetical protein.
  
     0.517
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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