ykfA_1 protein (Clostridium puniceum) - STRING interaction network

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[Homology]

Score

ykfA_1

Putative murein peptide carboxypeptidase. (287 aa)

Predicted Functional Partners:

nifJ_1

0.818

nifJ_2

0.818

yqjA_1

0.693

accB_2

0.651

csrA

0.623

fliW

0.611

fliG

0.555

OOM75026.1

0.555

OOM75381.1

0.507

mdh_1

0.496

Your Current Organism:

Clostridium puniceum

NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OOM75026.1	csrA	CLPUN_34630	CLPUN_20930	Flagellar biosynthesis chaperone.	Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.	0.593
OOM75026.1	fliG	CLPUN_34630	CLPUN_34600	Flagellar biosynthesis chaperone.	Flagellar motor switch protein FliG.	0.941
OOM75026.1	fliW	CLPUN_34630	CLPUN_20920	Flagellar biosynthesis chaperone.	Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.	0.585
OOM75026.1	ykfA_1	CLPUN_34630	CLPUN_15360	Flagellar biosynthesis chaperone.	Putative murein peptide carboxypeptidase.	0.555
OOM75026.1	yqjA_1	CLPUN_34630	CLPUN_40850	Flagellar biosynthesis chaperone.	Inner membrane protein YqjA.	0.424
OOM75381.1	ykfA_1	CLPUN_33270	CLPUN_15360	Dipeptidyl-peptidase 6.	Putative murein peptide carboxypeptidase.	0.507
accB_2	mdh_1	CLPUN_17570	CLPUN_07230	Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	NAD-dependent methanol dehydrogenase.	0.734
accB_2	nifJ_1	CLPUN_17570	CLPUN_20720	Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	Pyruvate-flavodoxin oxidoreductase.	0.930
accB_2	nifJ_2	CLPUN_17570	CLPUN_42950	Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	Pyruvate-flavodoxin oxidoreductase.	0.930
accB_2	ykfA_1	CLPUN_17570	CLPUN_15360	Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	Putative murein peptide carboxypeptidase.	0.651
csrA	OOM75026.1	CLPUN_20930	CLPUN_34630	Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.	Flagellar biosynthesis chaperone.	0.593
csrA	fliG	CLPUN_20930	CLPUN_34600	Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.	Flagellar motor switch protein FliG.	0.745
csrA	fliW	CLPUN_20930	CLPUN_20920	Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.	Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.	0.999
csrA	ykfA_1	CLPUN_20930	CLPUN_15360	Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.	Putative murein peptide carboxypeptidase.	0.623
csrA	yqjA_1	CLPUN_20930	CLPUN_40850	Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.	Inner membrane protein YqjA.	0.577
fliG	OOM75026.1	CLPUN_34600	CLPUN_34630	Flagellar motor switch protein FliG.	Flagellar biosynthesis chaperone.	0.941
fliG	csrA	CLPUN_34600	CLPUN_20930	Flagellar motor switch protein FliG.	Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.	0.745
fliG	fliW	CLPUN_34600	CLPUN_20920	Flagellar motor switch protein FliG.	Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.	0.860
fliG	ykfA_1	CLPUN_34600	CLPUN_15360	Flagellar motor switch protein FliG.	Putative murein peptide carboxypeptidase.	0.555
fliG	yqjA_1	CLPUN_34600	CLPUN_40850	Flagellar motor switch protein FliG.	Inner membrane protein YqjA.	0.555