Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOM79028.1 | OOM79632.1 | CLPUN_17550 | CLPUN_15800 | ABC-2 family transporter protein. | Hypothetical protein. | 0.540 |
OOM79028.1 | OOM79633.1 | CLPUN_17550 | CLPUN_15810 | ABC-2 family transporter protein. | Hypothetical protein. | 0.540 |
OOM79028.1 | grsB_3 | CLPUN_17550 | CLPUN_24970 | ABC-2 family transporter protein. | Gramicidin S synthase 2. | 0.669 |
OOM79028.1 | ybhR | CLPUN_17550 | CLPUN_17560 | ABC-2 family transporter protein. | Inner membrane transport permease YbhR. | 0.805 |
OOM79632.1 | OOM79028.1 | CLPUN_15800 | CLPUN_17550 | Hypothetical protein. | ABC-2 family transporter protein. | 0.540 |
OOM79632.1 | OOM79633.1 | CLPUN_15800 | CLPUN_15810 | Hypothetical protein. | Hypothetical protein. | 0.586 |
OOM79632.1 | birA | CLPUN_15800 | CLPUN_40020 | Hypothetical protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.640 |
OOM79632.1 | flr_1 | CLPUN_15800 | CLPUN_22400 | Hypothetical protein. | Flavoredoxin. | 0.455 |
OOM79632.1 | gloA | CLPUN_15800 | CLPUN_03280 | Hypothetical protein. | Lactoylglutathione lyase. | 0.558 |
OOM79632.1 | grsB_3 | CLPUN_15800 | CLPUN_24970 | Hypothetical protein. | Gramicidin S synthase 2. | 0.663 |
OOM79632.1 | nasF | CLPUN_15800 | CLPUN_01190 | Hypothetical protein. | uroporphyrinogen-III C-methyltransferase. | 0.728 |
OOM79632.1 | tadA | CLPUN_15800 | CLPUN_32580 | Hypothetical protein. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.497 |
OOM79632.1 | ybhR | CLPUN_15800 | CLPUN_17560 | Hypothetical protein. | Inner membrane transport permease YbhR. | 0.540 |
OOM79632.1 | ybhS | CLPUN_15800 | CLPUN_00440 | Hypothetical protein. | Inner membrane transport permease YbhS. | 0.540 |
OOM79633.1 | OOM79028.1 | CLPUN_15810 | CLPUN_17550 | Hypothetical protein. | ABC-2 family transporter protein. | 0.540 |
OOM79633.1 | OOM79632.1 | CLPUN_15810 | CLPUN_15800 | Hypothetical protein. | Hypothetical protein. | 0.586 |
OOM79633.1 | birA | CLPUN_15810 | CLPUN_40020 | Hypothetical protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.640 |
OOM79633.1 | flr_1 | CLPUN_15810 | CLPUN_22400 | Hypothetical protein. | Flavoredoxin. | 0.526 |
OOM79633.1 | gloA | CLPUN_15810 | CLPUN_03280 | Hypothetical protein. | Lactoylglutathione lyase. | 0.558 |
OOM79633.1 | grsB_3 | CLPUN_15810 | CLPUN_24970 | Hypothetical protein. | Gramicidin S synthase 2. | 0.663 |
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