Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ywrOGeneral stress protein 14. (193 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.707
nspC
Carboxynorspermidine/carboxyspermidine decarboxylase.
    
  0.707
OOM75751.1
NADPH-dependent FMN reductase.
    
 0.701
yabJ
2-iminobutanoate/2-iminopropanoate deaminase.
 
  
 0.691
rebM
demethylrebeccamycin-D-glucose O-methyltransferase.
  
  
 0.670
OOM80987.1
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
  0.617
ycgJ_1
Putative methyltransferase YcgJ.
     
 0.610
ycgJ_2
Putative methyltransferase YcgJ.
     
 0.610
OOM78375.1
Iron-sulfur flavoprotein.
 
  
 0.530
OOM73385.1
Putative phosphatase regulatory subunit.
  
     0.484
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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