Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
soj_3Sporulation initiation inhibitor protein Soj. (249 aa)    
Predicted Functional Partners:
parB
Putative chromosome-partitioning protein ParB; Belongs to the ParB family.
 
 
 0.971
noc
Nucleoid occlusion protein; Belongs to the ParB family.
 
 
 0.931
spo0C_1
Chromosome-partitioning protein Spo0J; Belongs to the ParB family.
 
 
 0.908
spo0C_2
Chromosome-partitioning protein Spo0J.
 
 
 0.878
dnaA_2
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 
 0.720
OOM77892.1
Beta-monoglucosyldiacylglycerol synthase.
  
 
 0.684
wfgD_1
UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD.
  
 
 0.684
arnC
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
  
 
 0.684
bcsA
Cellulose synthase catalytic subunit.
  
 
 0.684
OOM79816.1
Hypothetical protein.
  
 
 0.666
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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