Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOM78504.1 | barA_1 | CLPUN_18660 | CLPUN_05810 | Hypothetical protein. | Signal transduction histidine-protein kinase BarA. | 0.959 |
OOM78504.1 | barA_2 | CLPUN_18660 | CLPUN_18640 | Hypothetical protein. | Signal transduction histidine-protein kinase BarA. | 0.944 |
OOM78504.1 | barA_3 | CLPUN_18660 | CLPUN_20280 | Hypothetical protein. | Signal transduction histidine-protein kinase BarA. | 0.959 |
OOM78504.1 | barA_4 | CLPUN_18660 | CLPUN_23310 | Hypothetical protein. | Signal transduction histidine-protein kinase BarA. | 0.959 |
OOM78504.1 | cqsS_1 | CLPUN_18660 | CLPUN_37870 | Hypothetical protein. | CAI-1 autoinducer sensor kinase/phosphatase CqsS. | 0.986 |
OOM78504.1 | evgS | CLPUN_18660 | CLPUN_52370 | Hypothetical protein. | Sensor protein EvgS precursor. | 0.959 |
OOM78504.1 | gmr_3 | CLPUN_18660 | CLPUN_23430 | Hypothetical protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.869 |
OOM78504.1 | luxQ_1 | CLPUN_18660 | CLPUN_18670 | Hypothetical protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.817 |
OOM78504.1 | rpfC | CLPUN_18660 | CLPUN_17700 | Hypothetical protein. | Sensory/regulatory protein RpfC. | 0.868 |
OOM78504.1 | zraS_2 | CLPUN_18660 | CLPUN_30130 | Hypothetical protein. | Sensor protein ZraS. | 0.718 |
barA_1 | OOM78504.1 | CLPUN_05810 | CLPUN_18660 | Signal transduction histidine-protein kinase BarA. | Hypothetical protein. | 0.959 |
barA_1 | barA_2 | CLPUN_05810 | CLPUN_18640 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.995 |
barA_1 | barA_3 | CLPUN_05810 | CLPUN_20280 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.998 |
barA_1 | barA_4 | CLPUN_05810 | CLPUN_23310 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.998 |
barA_1 | cqsS_1 | CLPUN_05810 | CLPUN_37870 | Signal transduction histidine-protein kinase BarA. | CAI-1 autoinducer sensor kinase/phosphatase CqsS. | 0.997 |
barA_1 | evgS | CLPUN_05810 | CLPUN_52370 | Signal transduction histidine-protein kinase BarA. | Sensor protein EvgS precursor. | 0.998 |
barA_1 | gmr_3 | CLPUN_05810 | CLPUN_23430 | Signal transduction histidine-protein kinase BarA. | Cyclic di-GMP phosphodiesterase Gmr. | 0.995 |
barA_1 | luxQ_1 | CLPUN_05810 | CLPUN_18670 | Signal transduction histidine-protein kinase BarA. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.936 |
barA_1 | rpfC | CLPUN_05810 | CLPUN_17700 | Signal transduction histidine-protein kinase BarA. | Sensory/regulatory protein RpfC. | 0.994 |
barA_1 | zraS_2 | CLPUN_05810 | CLPUN_30130 | Signal transduction histidine-protein kinase BarA. | Sensor protein ZraS. | 0.996 |
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