Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nfrA2_2FMN reductase. (176 aa)    
Predicted Functional Partners:
nasF
uroporphyrinogen-III C-methyltransferase.
  
 
 0.698
frp_2
NADPH-flavin oxidoreductase.
  
     0.681
grsB_3
Gramicidin S synthase 2.
  
 0.663
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.608
hxlR_1
HTH-type transcriptional activator HxlR.
       0.574
gloA
Lactoylglutathione lyase.
  
    0.551
flr_2
Flavoredoxin.
 
 
 0.534
dhbE
2,3-dihydroxybenzoate-AMP ligase.
   
 
 0.533
OOM79586.1
CAAX amino terminal protease self- immunity.
 
    0.532
grsB_1
Gramicidin S synthase 2.
   
   0.515
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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