Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM78177.1Hypothetical protein. (262 aa)    
Predicted Functional Partners:
mobA
Molybdenum cofactor guanylyltransferase.
  
 0.975
OOM78176.1
Hypothetical protein.
  
 0.974
iscU
Iron-sulfur cluster assembly scaffold protein IscU.
  
 0.961
pucA
Putative xanthine dehydrogenase subunit A.
   
 0.961
OOM82363.1
Hypothetical protein.
  
 0.921
cinA_2
Putative competence-damage inducible protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
 
 0.845
OOM78178.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
 
 
 0.842
cutS
Carbon monoxide dehydrogenase small chain.
 
  
 0.795
xdhA
Xanthine dehydrogenase molybdenum-binding subunit.
 
   
 0.785
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
  
 0.776
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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