Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOM77746.1 | OOM77747.1 | CLPUN_21810 | CLPUN_21820 | Hypothetical protein. | Hypothetical protein. | 0.804 |
OOM77746.1 | nifJ_1 | CLPUN_21810 | CLPUN_20720 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.683 |
OOM77746.1 | nifJ_2 | CLPUN_21810 | CLPUN_42950 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.683 |
OOM77746.1 | rfbC_1 | CLPUN_21810 | CLPUN_10940 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.643 |
OOM77746.1 | rfbC_2 | CLPUN_21810 | CLPUN_27220 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.643 |
OOM77746.1 | rfbC_3 | CLPUN_21810 | CLPUN_30530 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.643 |
OOM77746.1 | rmlA_1 | CLPUN_21810 | CLPUN_10950 | Hypothetical protein. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.642 |
OOM77746.1 | wcaJ_2 | CLPUN_21810 | CLPUN_27240 | Hypothetical protein. | UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase. | 0.729 |
OOM77746.1 | ywqF_1 | CLPUN_21810 | CLPUN_10990 | Hypothetical protein. | UDP-glucose 6-dehydrogenase YwqF. | 0.651 |
OOM77746.1 | ywqF_2 | CLPUN_21810 | CLPUN_21220 | Hypothetical protein. | UDP-glucose 6-dehydrogenase YwqF. | 0.651 |
OOM77747.1 | OOM77746.1 | CLPUN_21820 | CLPUN_21810 | Hypothetical protein. | Hypothetical protein. | 0.804 |
nifJ_1 | OOM77746.1 | CLPUN_20720 | CLPUN_21810 | Pyruvate-flavodoxin oxidoreductase. | Hypothetical protein. | 0.683 |
nifJ_1 | nifJ_2 | CLPUN_20720 | CLPUN_42950 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate-flavodoxin oxidoreductase. | 0.999 |
nifJ_2 | OOM77746.1 | CLPUN_42950 | CLPUN_21810 | Pyruvate-flavodoxin oxidoreductase. | Hypothetical protein. | 0.683 |
nifJ_2 | nifJ_1 | CLPUN_42950 | CLPUN_20720 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate-flavodoxin oxidoreductase. | 0.999 |
rfbC_1 | OOM77746.1 | CLPUN_10940 | CLPUN_21810 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Hypothetical protein. | 0.643 |
rfbC_1 | rmlA_1 | CLPUN_10940 | CLPUN_10950 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.951 |
rfbC_1 | wcaJ_2 | CLPUN_10940 | CLPUN_27240 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase. | 0.753 |
rfbC_1 | ywqF_1 | CLPUN_10940 | CLPUN_10990 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | UDP-glucose 6-dehydrogenase YwqF. | 0.847 |
rfbC_1 | ywqF_2 | CLPUN_10940 | CLPUN_21220 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | UDP-glucose 6-dehydrogenase YwqF. | 0.716 |
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