STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM77576.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
tycC_2
Tyrocidine synthase 3.
  
 
  0.880
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
   
  0.864
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
   
  0.864
gltB_1
Ferredoxin-dependent glutamate synthase 1.
    
  0.860
grsB_3
Gramicidin S synthase 2.
  
 
 0.849
cinA_1
Putative competence-damage inducible protein; Belongs to the CinA family.
  
 
 0.809
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.805
grsB_4
Gramicidin S synthase 2; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
  0.772
lgrD_2
Linear gramicidin synthase subunit D.
  
 
  0.772
yitJ
Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase.
    
 0.748
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.