Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lytC_2N-acetylmuramoyl-L-alanine amidase LytC precursor. (676 aa)    
Predicted Functional Partners:
OOM75287.1
Hypothetical protein.
  
     0.640
lytB_6
Putative endo-beta-N-acetylglucosaminidase precursor.
  
     0.636
OOM76342.1
Cadherin-like beta sandwich domain protein.
  
     0.628
OOM78549.1
Hypothetical protein.
  
     0.570
OOM74339.1
O-antigen ligase.
  
     0.552
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.540
spoVD_1
Stage V sporulation protein D.
  
     0.520
czcB
Cobalt-zinc-cadmium resistance protein CzcB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.512
amyE
Alpha-amylase precursor.
  
  
  0.498
OOM70873.1
Bacterial dynamin-like protein.
  
     0.496
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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