Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
epsJ_2Putative glycosyltransferase EpsJ. (327 aa)    
Predicted Functional Partners:
kfoC_2
Chondroitin synthase.
 
 
 0.837
OOM77249.1
LicD family protein.
 
  
 0.743
wfgD_1
UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD.
 
 
 0.734
tuaE
Teichuronic acid biosynthesis protein TuaE.
 
  
 0.721
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
  
  
 0.698
grsB_3
Gramicidin S synthase 2.
  
 0.666
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.581
OOM79754.1
Hypothetical protein.
 
 
 0.574
OOM74341.1
Hypothetical protein.
 
 
 0.555
mbtB_1
Phenyloxazoline synthase MbtB.
  
 0.547
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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