Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ycnE_2Putative monooxygenase YcnE. (94 aa)    
Predicted Functional Partners:
polA_2
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
    0.524
ilvC_2
Ketol-acid reductoisomerase.
       0.516
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
 
      0.466
aroF_1
Phospho-2-dehydro-3-deoxyheptonate aldolase.
       0.454
OOM72019.1
Carboxymuconolactone decarboxylase family protein.
 
  
  0.445
OOM73384.1
Carboxymuconolactone decarboxylase family protein.
 
  
  0.437
OOM70329.1
Arylesterase.
  
  
 0.433
OOM76663.1
Cupin domain protein.
  
 
 0.429
OOM82224.1
Alpha/beta hydrolase family protein.
  
  
 0.411
bpoC
Putative non-heme bromoperoxidase BpoC.
  
  
 0.404
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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