Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM77300.1Beta-1,4-mannooligosaccharide phosphorylase. (338 aa)    
Predicted Functional Partners:
msmE_2
Multiple sugar-binding protein precursor.
 
   
 0.754
OOM77306.1
Mannan endo-1,4-beta-mannosidase precursor; Belongs to the glycosyl hydrolase 26 family.
 
   
 0.734
ugpA_2
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 
     0.656
sugB
Trehalose transport system permease protein SugB.
 
     0.650
OOM73533.1
Bacterial extracellular solute-binding protein.
 
   
 0.641
cytR_1
HTH-type transcriptional repressor CytR.
 
     0.584
mngB
Mannosylglycerate hydrolase.
 
  
 0.557
OOM78783.1
Beta-galactosidase BoGH2A precursor; Belongs to the glycosyl hydrolase 2 family.
 
    0.519
celE_3
Endoglucanase E precursor.
 
   
 0.459
OOM82283.1
Hypothetical protein.
  
     0.456
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (12%) [HD]