Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
znuA_1High-affinity zinc uptake system binding-protein ZnuA precursor. (309 aa)    
Predicted Functional Partners:
znuB
High-affinity zinc uptake system membrane protein ZnuB.
 
 
 0.974
znuC
High-affinity zinc uptake system ATP-binding protein ZnuC.
 
 
 0.965
OOM82157.1
Putative two-component membrane permease complex subunit.
 
  
 0.718
OOM79667.1
Putative two-component membrane permease complex subunit.
 
  
 0.706
dtxR
Diphtheria toxin repressor.
  
 
 0.679
mntR
Transcriptional regulator MntR.
  
 
 0.679
rpsN1
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.674
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.648
OOM78161.1
CobW/HypB/UreG, nucleotide-binding domain.
  
  
 0.612
OOM82033.1
Hypothetical protein.
  
   
 0.605
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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