Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
spoVAD_1Stage V sporulation protein AD. (333 aa)    
Predicted Functional Partners:
OOM76422.1
SpoVA protein.
 
  
 0.982
OOM76420.1
SpoVA protein.
 
  
 0.967
OOM76423.1
Hypothetical protein.
 
  
 0.949
OOM75054.1
SpoVA protein.
 
  
 0.927
gpr_2
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.919
OOM76424.1
Hypothetical protein.
 
     0.901
OOM75056.1
SpoVA protein.
 
  
 0.892
sleB
Spore cortex-lytic enzyme precursor.
  
  
 0.860
gerAA
Spore germination protein A1.
 
  
 0.853
spoVT
Stage V sporulation protein T.
  
   
 0.805
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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