close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM76425.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
OOM76424.1
Hypothetical protein.
 
     0.917
OOM76423.1
Hypothetical protein.
 
     0.903
spoVAD_1
Stage V sporulation protein AD.
 
     0.666
OOM74187.1
Hypothetical protein.
  
     0.656
OOM77548.1
Hypothetical protein.
  
     0.623
OOM76422.1
SpoVA protein.
 
     0.621
OOM77547.1
Hypothetical protein.
  
     0.617
OOM77549.1
Hypothetical protein.
  
     0.617
OOM76420.1
SpoVA protein.
 
     0.587
OOM72320.1
PRC-barrel domain protein.
  
     0.539
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.