STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM76113.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
OOM76114.1
Helix-turn-helix domain protein.
 
     0.909
OOM74186.1
Hypothetical protein.
  
     0.542
thrB_4
Homoserine kinase.
       0.516
OOM74198.1
Hypothetical protein.
   
  
 0.494
OOM73727.1
Hypothetical protein.
  
    0.435
OOM75714.1
Peptidase propeptide and YPEB domain protein.
  
     0.432
OOM71139.1
HD domain protein.
  
    0.429
OOM82384.1
SMI1 / KNR4 family protein.
  
     0.416
marA_2
Multiple antibiotic resistance protein MarA.
  
    0.414
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.