Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aldAPutative aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family. (493 aa)    
Predicted Functional Partners:
fmt_2
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   
 0.932
grsB_3
Gramicidin S synthase 2.
  
 0.922
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 0.912
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.912
gltB_1
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.912
mbtB_1
Phenyloxazoline synthase MbtB.
  
 0.884
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
 0.878
lgrD_4
Linear gramicidin synthase subunit D.
  
 0.842
puuB
Gamma-glutamylputrescine oxidoreductase.
  
 0.823
mmgC
acyl-CoA dehydrogenase.
  
 0.805
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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