Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
drrA_2Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. (155 aa)    
Predicted Functional Partners:
OOM75957.1
Hypothetical protein.
 
  
 0.953
OOM75955.1
Hypothetical protein.
 
  
 0.885
OOM78163.1
Hypothetical protein.
 
  
 0.844
OOM78164.1
Hypothetical protein.
 
  
 0.832
yxlF_3
Putative ABC transporter ATP-binding protein YxlF.
  
  
 0.516
prmA_1
Ribosomal protein L11 methyltransferase.
       0.467
lolD
Lipoprotein-releasing system ATP-binding protein LolD.
 
    0.463
cipA
Cellulosomal-scaffolding protein A precursor.
  
     0.411
OOM74841.1
Pyridoxamine 5'-phosphate oxidase.
   
    0.411
OOM82050.1
Ribosome-associated heat shock protein Hsp15.
   
    0.408
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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