Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM75382.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
OOM81655.1
Hypothetical protein.
  
     0.530
OOM72687.1
Hypothetical protein.
  
     0.509
OOM71090.1
Bacteriophage Gp15 protein.
  
     0.493
OOM75381.1
Dipeptidyl-peptidase 6.
       0.447
ywaC_1
GTP pyrophosphokinase YwaC.
  
     0.443
OOM75383.1
Hypothetical protein.
       0.435
OOM79282.1
CAAX amino terminal protease self- immunity.
  
     0.432
OOM75349.1
Hypothetical protein.
  
     0.425
pipB2
Secreted effector protein pipB2.
  
     0.424
yedZ
Sulfoxide reductase heme-binding subunit YedZ.
  
     0.415
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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