Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOM75276.1 | pmbA | CLPUN_33330 | CLPUN_33320 | Hypothetical protein. | Metalloprotease PmbA. | 0.429 |
OOM75276.1 | tldD | CLPUN_33330 | CLPUN_33310 | Hypothetical protein. | Metalloprotease TldD. | 0.429 |
OOM81020.1 | pmbA | CLPUN_11800 | CLPUN_33320 | Fibronectin-binding protein A N-terminus (FbpA). | Metalloprotease PmbA. | 0.544 |
OOM81020.1 | tldD | CLPUN_11800 | CLPUN_33310 | Fibronectin-binding protein A N-terminus (FbpA). | Metalloprotease TldD. | 0.544 |
pgdA_2 | pmbA | CLPUN_33300 | CLPUN_33320 | peptidoglycan-N-acetylglucosamine deacetylase. | Metalloprotease PmbA. | 0.465 |
pgdA_2 | tldD | CLPUN_33300 | CLPUN_33310 | peptidoglycan-N-acetylglucosamine deacetylase. | Metalloprotease TldD. | 0.465 |
phoR_11 | pmbA | CLPUN_46410 | CLPUN_33320 | Alkaline phosphatase synthesis sensor protein PhoR. | Metalloprotease PmbA. | 0.440 |
phoR_11 | tldD | CLPUN_46410 | CLPUN_33310 | Alkaline phosphatase synthesis sensor protein PhoR. | Metalloprotease TldD. | 0.441 |
pmbA | OOM75276.1 | CLPUN_33320 | CLPUN_33330 | Metalloprotease PmbA. | Hypothetical protein. | 0.429 |
pmbA | OOM81020.1 | CLPUN_33320 | CLPUN_11800 | Metalloprotease PmbA. | Fibronectin-binding protein A N-terminus (FbpA). | 0.544 |
pmbA | pgdA_2 | CLPUN_33320 | CLPUN_33300 | Metalloprotease PmbA. | peptidoglycan-N-acetylglucosamine deacetylase. | 0.465 |
pmbA | phoR_11 | CLPUN_33320 | CLPUN_46410 | Metalloprotease PmbA. | Alkaline phosphatase synthesis sensor protein PhoR. | 0.440 |
pmbA | tldD | CLPUN_33320 | CLPUN_33310 | Metalloprotease PmbA. | Metalloprotease TldD. | 0.900 |
tldD | OOM75276.1 | CLPUN_33310 | CLPUN_33330 | Metalloprotease TldD. | Hypothetical protein. | 0.429 |
tldD | OOM81020.1 | CLPUN_33310 | CLPUN_11800 | Metalloprotease TldD. | Fibronectin-binding protein A N-terminus (FbpA). | 0.544 |
tldD | pgdA_2 | CLPUN_33310 | CLPUN_33300 | Metalloprotease TldD. | peptidoglycan-N-acetylglucosamine deacetylase. | 0.465 |
tldD | phoR_11 | CLPUN_33310 | CLPUN_46410 | Metalloprotease TldD. | Alkaline phosphatase synthesis sensor protein PhoR. | 0.441 |
tldD | pmbA | CLPUN_33310 | CLPUN_33320 | Metalloprotease TldD. | Metalloprotease PmbA. | 0.900 |