Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trxB_4Thioredoxin reductase. (319 aa)    
Predicted Functional Partners:
OOM77129.1
Hypothetical protein.
 
    0.965
lhgO
L-2-hydroxyglutarate oxidase LhgO.
 
 0.953
soxA
Monomeric sarcosine oxidase.
 
 0.883
gltB_1
Ferredoxin-dependent glutamate synthase 1.
    
 0.819
trxB_1
Thioredoxin reductase.
  
 0.789
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.789
trxA_2
Thioredoxin; Belongs to the thioredoxin family.
  
 0.789
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
  
 
 0.785
ahpC
Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.751
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.698
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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