Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mnmG_1tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG. (425 aa)    
Predicted Functional Partners:
mnmE_2
tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.964
pyrK_2
Dihydroorotate dehydrogenase B, electron transfer subunit.
 
     0.948
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.871
OOM75094.1
Elongation factor Ts, mitochondrial.
  
   0.671
OOM74156.1
PRC-barrel domain protein.
  
     0.618
OOM71269.1
MazG-like family protein.
  
     0.602
ywaC_1
GTP pyrophosphokinase YwaC.
   
    0.593
yjbM
GTP pyrophosphokinase YjbM.
   
    0.593
ywaC_2
GTP pyrophosphokinase YwaC.
   
    0.593
OOM77574.1
HIRAN domain protein.
   
 
 0.592
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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