Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
OOM75084.1HIT-like protein. (114 aa)    
Predicted Functional Partners:
glnA_1
Glutamine synthetase.
  
   0.742
mtaB
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB.
   
   0.647
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
    0.643
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
   0.638
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
   0.638
cobB_1
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
    
  0.604
cobB_3
NAD-dependent protein deacetylase.
    
  0.604
OOM75086.1
Yqey-like protein.
     
 0.598
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
 
   0.591
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
   
   0.572
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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