STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM75116.1Hypothetical protein; BRO family, N-terminal domain. (251 aa)    
Predicted Functional Partners:
OOM75115.1
Helix-turn-helix protein.
       0.749
OOM75117.1
Hypothetical protein.
       0.682
OOM75118.1
Hypothetical protein.
  
    0.665
OOM82316.1
NAD(+)--arginine ADP-ribosyltransferase EFV.
 
     0.571
OOM75113.1
Hypothetical protein.
 
     0.570
OOM75124.1
ERF superfamily protein.
 
    0.560
OOM72910.1
Phage minor structural protein GP20.
  
   
 0.520
OOM82326.1
Hypothetical protein.
  
     0.504
xre_1
HTH-type transcriptional regulator Xre.
     
 0.494
OOM82333.1
Hypothetical protein.
 
    0.474
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.