Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOM74948.1Putative phosphatase. (278 aa)    
Predicted Functional Partners:
yidA_2
Sugar phosphatase YidA.
  
     0.773
bglF_11
PTS system beta-glucoside-specific EIIBCA component.
    
 0.773
OOM74133.1
Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase.
  
     0.768
OOM71293.1
Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase.
  
     0.752
ribD_2
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.666
udk_2
Uridine kinase.
   
 
  0.599
OOM74947.1
Putative NAD(P)H nitroreductase.
    
  0.555
bglH_7
aryl-phospho-beta-D-glucosidase BglH; Belongs to the glycosyl hydrolase 1 family.
       0.548
bglF_1
PTS system beta-glucoside-specific EIIBCA component.
    
 0.527
bglF_2
PTS system beta-glucoside-specific EIIBCA component.
    
 0.527
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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