Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xynYEndo-1,4-beta-xylanase Y precursor. (399 aa)    
Predicted Functional Partners:
celA_2
Endoglucanase A precursor.
 
 
 0.935
engD_1
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.934
engD_2
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.933
xynZ
Endo-1,4-beta-xylanase Z precursor.
   0.907
celD
Endoglucanase D precursor.
 
 
 
 0.887
xynD
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.872
celK
Cellulose 1,4-beta-cellobiosidase precursor; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
 
 
 
 0.857
celE_3
Endoglucanase E precursor.
 
 
 0.851
celA_1
Endoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.848
yesY
Putative rhamnogalacturonan acetylesterase YesY.
 
 
 0.839
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.