Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM74590.1Hemerythrin HHE cation binding domain protein. (182 aa)    
Predicted Functional Partners:
OOM74591.1
Hypothetical protein.
 
     0.936
OOM71477.1
Hypothetical protein.
 
     0.603
OOM71279.1
Hypothetical protein.
 
     0.549
asrC
Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
     0.508
nirC_2
Nitrite transporter NirC.
 
     0.493
livF_1
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
     
  0.478
livF_2
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
     
  0.478
asrA
Anaerobic sulfite reductase subunit A.
 
     0.475
asrB
Anaerobic sulfite reductase subunit B.
 
     0.464
livH_1
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
     
  0.461
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.