Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOM74266.1Hypothetical protein; Bactoprenol glucosyl transferase homolog from prophage CPS-53. (328 aa)    
Predicted Functional Partners:
arnT
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase.
 
 
 0.897
OOM74264.1
Hypothetical protein.
 
 
 0.796
grsB_3
Gramicidin S synthase 2.
  
 0.666
OOM79754.1
Hypothetical protein.
 
 
 0.586
mbtB_1
Phenyloxazoline synthase MbtB.
  
 0.547
lgrD_4
Linear gramicidin synthase subunit D.
  
 0.541
arnC
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
 
 
 0.512
ppsC_1
Plipastatin synthase subunit C.
  
 0.509
lgrD_1
Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.509
lgrD_3
Linear gramicidin synthase subunit D.
  
 0.509
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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