Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OOM74272.1Alkanesulfonate transporter permease subunit. (251 aa)    
Predicted Functional Partners:
OOM74273.1
NMT1/THI5 like protein.
 
 0.995
ssuB
Aliphatic sulfonates import ATP-binding protein SsuB.
 0.987
OOM70878.1
Putative thiamine biosynthesis protein.
 
 0.915
OOM77145.1
NMT1/THI5 like protein.
 
 0.912
tauB_3
Taurine import ATP-binding protein TauB.
 
 0.906
tauB_1
Taurine import ATP-binding protein TauB.
  
 0.892
tauB_2
Taurine import ATP-binding protein TauB.
  
 0.892
OOM82566.1
NMT1/THI5 like protein.
  
 0.890
OOM82576.1
Hypothetical protein.
  
 0.890
grsB_3
Gramicidin S synthase 2.
  
 
 0.768
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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